PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008222502.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 143aa    MW: 15884.2 Da    PI: 8.8384
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008222502.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.4e-0533721054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ +++  L++l+ +      +K + a++L +A++YI+ L
  XP_008222502.1 33 KERKEKLGERIVALQQLVSPY-----GKTDTASVLLEAMDYIRFL 72
                    6788889999999****9999.....9****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.2E-102291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.632372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-122985IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-42978IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.83E-63377No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MTEHKRSPCS VDQSSFTSLA SKRHKTDLSI STKERKEKLG ERIVALQQLV SPYGKTDTAS  60
VLLEAMDYIR FLHEQVKVLS APYLESTPTA KMQELEPYSL RSRGLCLVPV SCTAGVAQSN  120
GADIWAPIKN TSPKFENAIS QFH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008222500.11e-104PREDICTED: transcription factor bHLH113 isoform X1
RefseqXP_008222502.11e-104PREDICTED: transcription factor bHLH113 isoform X2
SwissprotQ9LT672e-35BH113_ARATH; Transcription factor bHLH113
TrEMBLM5XFT61e-102M5XFT6_PRUPE; Uncharacterized protein
TrEMBLM5XT991e-102M5XT99_PRUPE; Uncharacterized protein
STRINGPOPTR_0013s13050.15e-82(Populus trichocarpa)
STRINGGLYMA02G15520.11e-81(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.51e-65bHLH family protein